fangly

Math-Random-MT-Perl

Pure Perl version of the Math::Random::MT module to generate random numbers using the Mersenne-Twister algorithm

io-pager

IO::Pager - Select a pager and pipe text to it if destination is a TTY

AmpliCopyrighter

CopyRighter

bio-phylo

Phyloinformatic analysis using Perl

file-sharednfslock

File::SharedNFSLock Perl module

heatmapper

Heatmapper - Make heatmaps of biological communities

MetaVelvet

An extension of Velvet assembler to de novo metagenome assembly from short sequence reads

module-install-readmefrompod

(perl) A Module::Install extension to automatically convert POD to a README

OPP

Other People's Pipeline

pod-simple

Framework for Parsing and Formatting POD

styles

Repository of CSL citation styles.

covr

Test coverage reports for R

fastq-tools

Small utilities for working with fastq sequence files.

hitman

HIgh Throughput Microbial ANalysis

IPC-Run

Clone of http://svn.ali.as/cpan/trunk/IPC-Run

lintr

Static Code Analysis for R

math--gsl

Perl interface to the GNU Scientific Library

merge_gg_silva

Combine the goodness of the Greengenes and Silva microbial databases

minced

Mining CRISPRs in Environmental Datasets

module-install-podfromeuclid

Module::Install extension to make POD from Getopt::Euclid-based scripts

MPAndroidChart_moveViewToX

Testing moveViewToX()

nesoni

High throughput sequencing analysis tools

Osmand

osmand

phyloseq

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:

pod-simple-select

qiime

Quantitative Insights Into Microbial Ecology (QIIME): Official repository for software and unit tests

R-Box

R package for Sublime Text 3

seq_crumbs

Little sequence file utilities meant to work within Unix pipelines

tax2tree

Automated taxonomy decoration onto a tree

test-more

Test::More, Test::Simple and Test::Builder Perl modules for writing tests