FabianAicheler's repositories
NRPSpredictor2
NRPSpredictor2 is a program to predict the specificity of bacterial and fungal adenylation domains.
pmlb
PMLB: A large, curated repository of benchmark datasets for evaluating supervised machine learning algorithms.
OpenMS
The codebase of the OpenMS project
deregnet
Find deregulated signaling pathways
prosit
ProteomeTools Spectrum predIction Tool
rmageddon-cli
A small linting command line tool for R container evaluation
r-container-lib
A collection of project-related Dockerfiles for a controlled R environment with defined R packages
tensor_toolbox
MATLAB Tensor Toolbox (by Tamara Kolda)
scikit-tensor
Python library for multilinear algebra and tensor factorizations
r-container-template
A collection of project-related R scripts with defined package lists and Dockerfiles for reproducible R environments
UMTutorials
Tutorials as used in the user meetings. (Please assign a git tag for the revision used for the UM)
rvtests
Rare variant test software for next generation sequencing data
lrslibrary
Low-Rank and Sparse Tools for Background Modeling and Subtraction in Videos
sklearn-benchmarks
A centralized repository to report scikit-learn model performance across a variety of parameter settings and data sets.
THIRDPARTY
External dependencies (e.g. search engine binaries) packaged in installers
GENEPARK
GENEPARK is a large study that aimed for finding blood-based biomarkers Parkinson's disease. Here we provide the R code for reproducing the main results of the project.
awesome
:sunglasses: Curated list of awesome lists
awesome-python
A curated list of awesome Python frameworks, libraries, software and resources
awesome-cpp
A curated list of awesome C/C++ frameworks, libraries, resources, and shiny things. Inspired by awesome-... stuff.
awesome-machine-learning
A curated list of awesome Machine Learning frameworks, libraries and software.
awesome-rl
Reinforcement learning resources curated
awesome-modern-cpp
A collection of resources on modern C++
awesome-datascience
:memo: An awesome Data Science repository to learn and apply for real world problems.
workflows
KNIME workflows for use with OpenMS.