Eric Trautmann's repositories
baccus_lab_igor
Common files for online and offline data analysis using Igor Pro
baccus_lab_matlab
Matlab scripts and functions for importing and working with Igor binary data
affinewarp
An implementation of piecewise linear time warping for multi-dimensional time series alignment
datajoint-churchland
Datajoint pipelines and code for the Churchland lab.
datajoint-pacman
PacMan Task DataJoint pipeline
hcl-picker
:art: Colorpicker for data
jemdoc
Light text markup for creating websites
jetpack
🔋 Utilities for scientific python
jks-ros-pkg
Automatically exported from code.google.com/p/jks-ros-pkg
katya-interface
hottub-interface
katya-server
hot tub controller server
massren
massren - Easily rename multiple files using your text editor
matlab-imagestack
Lightweight Matlas class which wraps multichannel ImageStacks
matlab-utils
Collection of miscellaneous shared utils for Matlab
matlab-utils-emt
Collection of Matlab utilities
nens230-website-2015
http://nens230.stanford.edu
NeuroPyxels
NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a pythonist who really did not want to transition to MATLAB to work with Neuropixels: it features a suite of core utility functions for loading, processing and plotting Neuropixels data.
pacman-data-load
matlab code for loading pacman behavior and neural data
pacman-import
Code for processing and syncing pacman behavior and neural data
surf-ice
GLSL surface rendering source code. Compiled versions available from NITRC. Loads 3DS, CTM, DXF, FreeSurfer, GII (GIfTI), GTS, LWO2, MS3D, MZ3, NV (BrainNetViewer), OBJ, OFF, PLY, STL, VTK. Tractography formats include BFloat, PDB, TCK, TRK, and VTK. Also NIfTI format voxelwise images.
trial-data
Interfaces and utilities for analysis of neurophysiology and behavioral data
trial-data-utils-emt
Utilities for use with trial-data