Emily Thomas's repositories
2020-essential-maths
2020 course materials for DTC essential maths
3D-VAE
A variational autoencoder for volumetric shape generation
ANHIR_MW
Software used by the AGH team during the ANHIR challenge.
CMEA
CMEA: An R package for Systematic Exploration of Single-Cell Morphological Phenotypes from Transcriptomic Profile
data-driven-drug-discovery
Materials for the SABS-R3 Data Driven Drug Discovery module
PathProfiler
Pipeline for computational pathology
ProbabilisticTeacher
An official implementation of ICML 2022 paper "Learning Domain Adaptive Object Detection with Probabilistic Teacher"."
PyOpenWorm
Unified, simple data access python library for data & facts about C. elegans anatomy
pytorch-CycleGAN-and-pix2pix
Image-to-Image Translation in PyTorch
PyTorch-VAE
A Collection of Variational Autoencoders (VAE) in PyTorch.
single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
ssd.pytorch
A PyTorch Implementation of Single Shot MultiBox Detector
stat453-deep-learning-ss21
STAT 453: Intro to Deep Learning @ UW-Madison (Spring 2021)
swav
PyTorch implementation of SwAV https//arxiv.org/abs/2006.09882
tracker-commons
Compilation of information and code bases related to open-source trackers for C. elegans
tybalt
Training and evaluating a variational autoencoder for pan-cancer gene expression data
UnsupervisedPointCloudReconstruction
Experiments on unsupervised point cloud reconstruction.