Failing to import esutil
n1md4 opened this issue · comments
debian:~/code/git/esutil$ python3 setup.py install --home=/opt/local/esutil/0.6.5/
running install
running build
running build_py
running build_ext
running install_lib
creating /opt/local/esutil/0.6.5/lib
creating /opt/local/esutil/0.6.5/lib/python
creating /opt/local/esutil/0.6.5/lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/oracle_util.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/sqlite_util.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/random.py -> /opt/local/esutil/0.6.5//lib/python/esutil
creating /opt/local/esutil/0.6.5/lib/python/esutil/unit_tests
copying build/lib.linux-x86_64-3.5/esutil/unit_tests/hist_tests.py -> /opt/local/esutil/0.6.5//lib/python/esutil/unit_tests
copying build/lib.linux-x86_64-3.5/esutil/unit_tests/__init__.py -> /opt/local/esutil/0.6.5//lib/python/esutil/unit_tests
copying build/lib.linux-x86_64-3.5/esutil/unit_tests/int_tests.py -> /opt/local/esutil/0.6.5//lib/python/esutil/unit_tests
copying build/lib.linux-x86_64-3.5/esutil/unit_tests/sfile_tests.py -> /opt/local/esutil/0.6.5//lib/python/esutil/unit_tests
copying build/lib.linux-x86_64-3.5/esutil/unit_tests/pickle_tests.py -> /opt/local/esutil/0.6.5//lib/python/esutil/unit_tests
copying build/lib.linux-x86_64-3.5/esutil/unit_tests/htm_tests.py -> /opt/local/esutil/0.6.5//lib/python/esutil/unit_tests
copying build/lib.linux-x86_64-3.5/esutil/sfile.py -> /opt/local/esutil/0.6.5//lib/python/esutil
creating /opt/local/esutil/0.6.5/lib/python/esutil/recfile
copying build/lib.linux-x86_64-3.5/esutil/recfile/Util.py -> /opt/local/esutil/0.6.5//lib/python/esutil/recfile
copying build/lib.linux-x86_64-3.5/esutil/recfile/test.py -> /opt/local/esutil/0.6.5//lib/python/esutil/recfile
copying build/lib.linux-x86_64-3.5/esutil/recfile/_records.cpython-35m-x86_64-linux-gnu.so -> /opt/local/esutil/0.6.5//lib/python/esutil/recfile
copying build/lib.linux-x86_64-3.5/esutil/recfile/__init__.py -> /opt/local/esutil/0.6.5//lib/python/esutil/recfile
copying build/lib.linux-x86_64-3.5/esutil/recfile/records.py -> /opt/local/esutil/0.6.5//lib/python/esutil/recfile
copying build/lib.linux-x86_64-3.5/esutil/__init__.py -> /opt/local/esutil/0.6.5//lib/python/esutil
creating /opt/local/esutil/0.6.5/lib/python/esutil/stat
copying build/lib.linux-x86_64-3.5/esutil/stat/__init__.py -> /opt/local/esutil/0.6.5//lib/python/esutil/stat
copying build/lib.linux-x86_64-3.5/esutil/stat/unit_tests.py -> /opt/local/esutil/0.6.5//lib/python/esutil/stat
copying build/lib.linux-x86_64-3.5/esutil/stat/_stat_util.cpython-35m-x86_64-linux-gnu.so -> /opt/local/esutil/0.6.5//lib/python/esutil/stat
copying build/lib.linux-x86_64-3.5/esutil/stat/util.py -> /opt/local/esutil/0.6.5//lib/python/esutil/stat
copying build/lib.linux-x86_64-3.5/esutil/stat/_chist.cpython-35m-x86_64-linux-gnu.so -> /opt/local/esutil/0.6.5//lib/python/esutil/stat
copying build/lib.linux-x86_64-3.5/esutil/ostools.py -> /opt/local/esutil/0.6.5//lib/python/esutil
creating /opt/local/esutil/0.6.5/lib/python/esutil/cosmology
copying build/lib.linux-x86_64-3.5/esutil/cosmology/cosmology.py -> /opt/local/esutil/0.6.5//lib/python/esutil/cosmology
copying build/lib.linux-x86_64-3.5/esutil/cosmology/__init__.py -> /opt/local/esutil/0.6.5//lib/python/esutil/cosmology
copying build/lib.linux-x86_64-3.5/esutil/cosmology/_cosmolib.cpython-35m-x86_64-linux-gnu.so -> /opt/local/esutil/0.6.5//lib/python/esutil/cosmology
copying build/lib.linux-x86_64-3.5/esutil/hdfs.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/fits.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/coords.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/pbar.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/misc.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/algorithm.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/xmltools.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/wcsutil.py -> /opt/local/esutil/0.6.5//lib/python/esutil
creating /opt/local/esutil/0.6.5/lib/python/esutil/integrate
copying build/lib.linux-x86_64-3.5/esutil/integrate/__init__.py -> /opt/local/esutil/0.6.5//lib/python/esutil/integrate
copying build/lib.linux-x86_64-3.5/esutil/integrate/_cgauleg.cpython-35m-x86_64-linux-gnu.so -> /opt/local/esutil/0.6.5//lib/python/esutil/integrate
copying build/lib.linux-x86_64-3.5/esutil/integrate/util.py -> /opt/local/esutil/0.6.5//lib/python/esutil/integrate
copying build/lib.linux-x86_64-3.5/esutil/cosmology_purepy.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/numpy_util.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/stomp_util.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/plotting.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/json_util.py -> /opt/local/esutil/0.6.5//lib/python/esutil
copying build/lib.linux-x86_64-3.5/esutil/io.py -> /opt/local/esutil/0.6.5//lib/python/esutil
creating /opt/local/esutil/0.6.5/lib/python/esutil/htm
copying build/lib.linux-x86_64-3.5/esutil/htm/__init__.py -> /opt/local/esutil/0.6.5//lib/python/esutil/htm
copying build/lib.linux-x86_64-3.5/esutil/htm/unit_tests.py -> /opt/local/esutil/0.6.5//lib/python/esutil/htm
copying build/lib.linux-x86_64-3.5/esutil/htm/_htmc.cpython-35m-x86_64-linux-gnu.so -> /opt/local/esutil/0.6.5//lib/python/esutil/htm
copying build/lib.linux-x86_64-3.5/esutil/htm/htm.py -> /opt/local/esutil/0.6.5//lib/python/esutil/htm
copying build/lib.linux-x86_64-3.5/esutil/htm/htmc.py -> /opt/local/esutil/0.6.5//lib/python/esutil/htm
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/oracle_util.py to oracle_util.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/sqlite_util.py to sqlite_util.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/random.py to random.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/unit_tests/hist_tests.py to hist_tests.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/unit_tests/__init__.py to __init__.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/unit_tests/int_tests.py to int_tests.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/unit_tests/sfile_tests.py to sfile_tests.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/unit_tests/pickle_tests.py to pickle_tests.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/unit_tests/htm_tests.py to htm_tests.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/sfile.py to sfile.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/recfile/Util.py to Util.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/recfile/test.py to test.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/recfile/__init__.py to __init__.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/recfile/records.py to records.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/__init__.py to __init__.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/stat/__init__.py to __init__.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/stat/unit_tests.py to unit_tests.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/stat/util.py to util.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/ostools.py to ostools.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/cosmology/cosmology.py to cosmology.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/cosmology/__init__.py to __init__.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/hdfs.py to hdfs.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/fits.py to fits.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/coords.py to coords.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/pbar.py to pbar.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/misc.py to misc.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/algorithm.py to algorithm.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/xmltools.py to xmltools.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/wcsutil.py to wcsutil.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/integrate/__init__.py to __init__.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/integrate/util.py to util.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/cosmology_purepy.py to cosmology_purepy.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/numpy_util.py to numpy_util.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/stomp_util.py to stomp_util.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/plotting.py to plotting.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/json_util.py to json_util.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/io.py to io.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/htm/__init__.py to __init__.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/htm/unit_tests.py to unit_tests.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/htm/htm.py to htm.cpython-35.pyc
byte-compiling /opt/local/esutil/0.6.5//lib/python/esutil/htm/htmc.py to htmc.cpython-35.pyc
running install_egg_info
Writing /opt/local/esutil/0.6.5//lib/python/esutil-0.6.5.egg-info
debian:~/code/git/esutil$ python3
Python 3.5.3 (default, Nov 18 2020, 21:09:16)
[GCC 6.3.0 20170516] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import esutil
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/npkd46/code/git/esutil/esutil/__init__.py", line 113, in <module>
from . import integrate
File "/home/npkd46/code/git/esutil/esutil/integrate/__init__.py", line 1, in <module>
from . import util
File "/home/npkd46/code/git/esutil/esutil/integrate/util.py", line 20, in <module>
from .. import stat
File "/home/npkd46/code/git/esutil/esutil/stat/__init__.py", line 27, in <module>
from . import util
File "/home/npkd46/code/git/esutil/esutil/stat/util.py", line 69, in <module>
from . import _stat_util
ImportError: cannot import name '_stat_util'
>>>
Any ideas?
It looks like you are importing it from the directory where the git checkout is. python is getting confused and trying to import the local directory.
can you try changing to another directory and then running python?
Thanks. Some progress.
debian:~$ env|grep esutil
PYTHONPATH=:/opt/local/esutil/0.6.5/
debian:~$ python3
Python 3.5.3 (default, Nov 18 2020, 21:09:16)
[GCC 6.3.0 20170516] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import esutil
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
ImportError: No module named 'esutil'
looks like you need additional parts to your python path. From the install it seems it should be /opt/local/esutil/0.6.5/lib/python/
# bash
export PYTHONPATH=$PYTHONPATH:/opt/local/esutil/0.6.5/lib/python/
# chs/tcsh
setenv PYTHONPATH $PYTHONPATH:/opt/local/esutil/0.6.5/lib/python/
By the way, you can also use pip install esutil (or conda install esutil if you have conda forge in your channels) and then you don't have to install from source
Setting the environment correctly works, thank you.
I usually use pip but there are problems with their platform at the moment status.python.org
Great, I'm glad it worked for you. I'm going to close.