Biswanath Saha's repositories
Neuromatch_Project
Project for neuromatch academy coursework
Swc-plugins-for-Imaris-10
SWC plugins for importing swc files as filaments and exporting filaments as swc from Imaris 10.
awesome_bioinformatics_resources
Tools for protein modelling, docking, diffusion-models
bypass-paywalls-chrome
Bypass Paywalls web browser extension for Chrome and Firefox.
ChromaticAberrationCorrection
Codes to measure and then correct chromatic aberration.
clipseg
This repository contains the code of the CVPR 2022 paper "Image Segmentation Using Text and Image Prompts".
darknet
Convolutional Neural Networks
DataScience-and-ML-projects
Repo to document my learning as well as backup of previous projects
FluroView
A Python package for visualization of biological data, similar to how composite images are viewed in ImageJ
QDyeFinder
QDye Finder is a pipeline that is used to cluster fragments based on their colour alone
Story_in_pixels
Repo to implement #tidytueday data analysis in Python.
dCrawler
dCrawler is a fully independent clustering algorithm that only requires a distance threshold (Th(d))
deepmind-research
This repository contains implementations and illustrative code to accompany DeepMind publications
Exploits_and_scripts
A small repo of exploits and other tools I used to do in CTF challenges
imagej-tutorials
ImageJ2 programming examples
imglab
To speedup and simplify image labeling/ annotation process with multiple supported formats.
Mask_RCNN
Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow
MedSAM
The official repository for MedSAM: Segment Anything in Medical Images.
OpenAI_ChatGPT_APIs
Trying out the new ChatGPT and Whisper APIs to build something
Paper_implementations
Learning how to implement models from older research papers
PoKi-Poems-by-Kids
PoKi: A Large Dataset of Poems by Children
pyclesperanto_prototype
http://clesperanto.net
Road-to-learning-ML-old-check-the-portfolio-repo-for-newer-projects-
Repo to document my learning (trying to recover stuff from backups)
ScribblePrompt
[ECCV 2024] ScribblePrompt: Fast and Flexible Interactive Segmentation for Any Medical Image