Josymar Torrejón-Magallanes's repositories
octopusNiche
Code and data input to replicate the article "Climate change effect on Octopus maya (Voss and Solís-Ramírez, 1966) suitability and distribution in the Yucatan Peninsula, Gulf of Mexico: A correlative and mechanistic approach".
APAM
An age-based state-space stock assessment model for the stock of American plaice on the Grand Bank of Newfoundland.
BayesianSDM
Bayesian Hierarchical species distribution model
envirCopernicus
Shows how to process files downloaded from copernicus
FSA
FSA (Fisheries Stock Assessment) package provides R functions to conduct typical introductory fisheries analyses.
Gtransition
Stochastic growth expressed through a transition matrix for the growth variability as probability of shift from one length class to another during a time period.
LBSPR
Length Based Spawning Potential Ratio R Package
miscellaneousPlots
Only for build non common plots: equations, flow charts, etc, related to stock assessment, populations dynamics and management strategy evaluation
MVEchubmackerel
Code related to the article "Modeling the Pacific chub mackerel (Scomber japonicus) ecological niche and future scenarios in the northern Peruvian Current system".
niche_fisheries
Code to replicate the article from Ángeles-González & Torrejón-Magallanes (2022)
paper_recruitmentSize
Spatio-temporal variability of anchoveta recruitment size
predator-prey
Predator-prey simple code
rangemap
rangemap: Simple Tools for Defining Species Ranges
RepSeg
Herramientas para la generación de reportes de captura, esfuerzo y CPUE
SAM
Git page for SAM R-package
spatial-bycatch
Which species distribution model best predicts fisheries bycatch?