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ed29rice's starred repositories

HUHgle-Colab-Notebook

The code for the HUHgle Colab Notebook which enables easy access to, and use of, HUHgle: a Python-based interactive tool for the visualization, design, and optimization of substrates for HUH-tag mediated covalent labeling of proteins of interest with ssDNA substrates of interest.

Language:Jupyter NotebookMIT100

AMD_ML_Chromatin

Language:Python100

ctbp-techtalks

This is a repo used for CTBP tech talks

Language:Jupyter Notebook800

PyMEGABASE

Language:PythonMIT700

pydca

Direct coupling analysis software for protein and RNA sequences

Language:PythonMIT100

OpenMiChroM

Language:Jupyter NotebookMIT1200

OpenSMOG

OpenSMOG is a Python library for performing molecular dynamics simulations using Structure-Based Models. OpenSMOG uses OpenMM.

Language:PythonMIT1100