dvm-shlee

fMRI_analysis_in_python

The lecture notes for the internal python course of fMRI data analysis

PyNIT

Python based NeuroImaging Toolkit

bmloader

Blackrock Microsystem Data Loader for Python

brkraw

BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data

brkraw-bart

BART Toolbox integration for Brkraw

brkraw-snippets

BrkRaw Snippets: A modular extension for BrkRaw designed for customizing the tasks such as reconstruction and BIDS conversion with minimal coding.

my_pyo3

nordic_cli

Python module and command line interface (CLI) for performing the NORDIC denoising, powered by MATLAB compiler SDK

paralexe

Parallel process Executor

rasp_datalogger

Raspberry Pi based data logger for functional MRI research.

ratconnectome

Python API for neuroVIISAS Rat Connectome Project

slfmri

casni

Containerized App Scheduler for NeuroImaging (CASNI)

eniat

Experimental NeuroImaging Analysis Tools (ENIAT)

miresi

Miscellaneous Remote System Interface

reshipe

re(sh)ipe is a compact yet sophisticated Python module that streamlines complex data transformations and validations through an intuitive, YAML-based interface.

xnippet

Xnippet is an Python module that facilitates the sharing and dynamic integration of code snippets, enhancing extensibility with plugin, preset, spec, and recipe snippets directly via GitHub without local installation.

bids-specification

Brain Imaging Data Structure (BIDS) Specification

bids-website

Website for the Brain Imaging Data Structure standard.

dvm-shlee.github.io

espirit-python

Python ESPIRiT implementation

MultiRat

A Rat fMRI multi-center study

nordic-python

pynsp

Python Neuro-imaging Signal Process tool

PyNVT

rawdata

Repository of the sample datasets from Bruker MRI scanner. (PvDatasets)

StandardRat

A Rat fMRI standardized protocol