dukecomeback's repositories
pal4nal.pl
similar as what pal2nal.pl do, i.e. change protein alignment into CDS alignment, except some difference.
bad-sequence-remover
Removes spurious sequences from the input alignment.
sterlet_Msch
codes/scripts for sterlet project
awesome-genome-visualization
A list of interesting genome browser or genome-browser-like implementations
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exonerate
A generic tool for sequence alignment
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Gblockc.pl
to get around the bug with Gblocks -t=c
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genblastg_patch
patched version of genblastg v.139 of the Jack Chen lab
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genomeGTFtools
convert various features into a GFF-like file for use in genome browsers
Language:Python000
maf2diff.pl
Calculate sequence difference from a maf alignment file
phast
PHAST
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UniqueKMER
Generate unique KMERs for every contig in a FASTA file
MIT000
XiphoMicroEvo
codes for Xiphophorus micro-evolution