Bioconductor package install with newer R bug
nbroguiere opened this issue · comments
When following the tutorial, when calling source("../Deconvolution_functions"), it gave the error message:
"Loading required package: MAST
Error: With R version 3.5 or greater, install Bioconductor packages using BiocManager; see https://bioconductor.org/install"
Which was solved by replacing:
"source("https://bioconductor.org/biocLite.R")
biocLite("MAST")"
in the source by:
"BiocManager::install("MAST")"
It might make sense to do it this way in the first place in your package?
Thanks