David Osumi-Sutherland (dosumis)

dosumis

Geek Repo

Company:www.virtualflybrain.org

Home Page:http://www.linkedin.com/in/osumisutherland

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David Osumi-Sutherland's repositories

ABC_2_CAS

Mapping ABC atlas schema to Cell Annotation Schema

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abc_atlas_access

Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas

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aism

An Insect Anatomy Ontology

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CellphoneDB

CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.

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cryoem

CRYOEM ontology repository

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CxG_test

OBASK CxG Pandasaurus test

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flybase-ontology-scripts

Scripts for working with FlyBase ontologies, uses include bulk ontology edits and report generation.

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navis

Python 3 library for Neuron Analysis and Visualization

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obook

OBO Organized Knowledge: Training materials for becoming an OBO engineer

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ontology-metadata

New repo to decouple work on metadata from IAO release cycle

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ontology_editor_training

A collection of ontology editor training materials

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Pheno_odk_test

A test repo demonstrating design pattern -based phenotype ontology development using the Ontology Development Kit

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prototypes

repository for building and sharing small prototype ontologies

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purl.obolibrary.org

A new system for managing OBO PURLs

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scrattch.taxonomy

Allen Institute Taxonomy building R package

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semwebdevtest

recruitment test

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single-cell-curation

Code and documentation for the curation of cellxgene datasets

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super_simple_test

Just for testing

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tsv2pdm

A simple Python module for generating and processing python data structures from tsv files.

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uPheno_ODK_test

Testing the new version of ODK with uPheno patterns

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