dominikgrimm

Dominik Grimm's repositories

Computational Framework for Genome-Wide Association Studies and Meta-Studies in C/C++ with Python Interfaces

Language:C++11 20

Structural Variant Machine (SV-M) to accurately predict InDels from NGS paired-end short reads

Language:C++GPL-3.02 10

A collection of various deep learning architectures, models, and tips

Language:Jupyter NotebookMIT100

The evaluation of tools used to predict the impact of missense mutations is hindered by two types of circularity

Language:PythonGPL-3.01 10

Ridge Regression and SVM Classification

Language:Jupyter NotebookMIT1 10

GWAS catalogue for Arabidopsis thaliana

Language:VueMIT010

AraPheno source code for http://arapheno.1001genomes.org

Language:Python010

Double Digest Algorithm Example

Language:Jupyter NotebookGPL-3.0010

Genome-wide detection of intervals of genetic heterogeneity (Llinares-Lopez et al., ISMB/Bioinformatics 2015) http://goo.gl/h9gl6K

Language:C010

Multi-task feature selection coupled with multiple network regularizers (Sugiyama et al, SDM 2014) http://goo.gl/4q78Yp

Language:RGPL-2.0010

Distances and representations of persistence diagrams

Language:PythonMIT000

A network-guided multi-locus association mapping method (Azencott et al., ISMB/Bioinformatics 2013) http://goo.gl/a8f6az

Language:C++010