dmnfarrell

Damien Farrell's repositories

pandastable

Table analysis in Tkinter using pandas DataFrames.

Language:PythonNOASSERTION604 30 224

tkintertable

A pure Python library for adding tables to a Tkinter application

Language:PythonNOASSERTION385 23 78

tablexplore

Table analysis and plotting application written in PySide2/PyQt5

Language:PythonGPL-3.0114 7 7

epitopepredict

Python package and command line tool for epitope prediction

Language:Jupyter NotebookNOASSERTION46 6 9

teaching

scripts and notes for learning

Language:Jupyter NotebookMIT34 3 2

smallrnaseq

small rna-seq analysis package

Language:PythonGPL-3.029 5 13

pybioviz

bioinformatics visualization tools with pyviz/bokeh

Language:Jupyter NotebookGPL-3.017 4 5

pathogenie

Desktop tool for microbial genome annotation and gene detection

Language:Jupyter NotebookGPL-3.012 3 4

snipgenie

command line and desktop tool for microbial variant calling

Language:Jupyter NotebookGPL-3.08 4 5

epitopemap

A web application for visualizing MHC binding predictions

Language:JavaScriptApache-2.06 4 6

dmnfarrell.github.io

my pages

Language:HTMLNOASSERTION5 4 16

learnct

Java CT Simulation

Language:Java5 40

mtbc_analyses

Code for genomics analysis of MTBC locii.

Language:Jupyter NotebookAGPL-3.05 30

mtbdiff

Characterization of Mycobacterium tuberculosis complex species using mummer and nucdiff

Language:Jupyter NotebookGPL-3.04 3 1

peat

PEAT is a suite of programs for capturing, analyzing and predicting biophysical characteristics of proteins

Language:MercuryNOASSERTION3 30

batchfilerename

Batch file renaming utility written in Python

Language:PythonGPL-3.01 3 1

binderapps

bokeh binder apps

Language:PythonGPL-3.01 30

btbabm

Agent based model for bovine TB spread in herds

Language:Jupyter NotebookApache-2.01 20

gordon-group

scripts and data for gordon group papers

Language:Jupyter NotebookApache-2.01 30

amr-project

notebooks and code for AMR gene detection and other tools

Language:Jupyter NotebookLGPL-3.0030

digitalart

digital art stuff

Language:CSSMIT030

nanopore-project

scripts/notes for bacterial nanopore sequencing

Language:Jupyter NotebookGPL-3.0030

podcast-example

Example jekyll podcast site

Language:SCSS020

tracebtb

M.bovis WGS surveillance tools.

Language:Jupyter NotebookGPL-3.0020

zimgeo

zimbabwe gis

Language:Jupyter NotebookGPL-3.003 1