Error after installation via pip

Question

Error after installation via pip

bradkyle opened this issue 7 years ago · comments

I have recently attempted to install tensorboard via pip as detailed in the README.md. The installation was deemed successful however when I try to run tensorboard after the installation, I keep on receiving an import/ undefined symbol error as seen below.

`Traceback (most recent call last):
  File "/usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/tensorboard/tensorboard.py", line 32, in <module>
    from tensorflow.python.summary import event_file_inspector as efi
  File "/usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/python/summary/event_file_inspector.py", line 122, in <module>
    from tensorflow.python.platform import gfile
  File "/usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/python/platform/gfile.py", line 22, in <module>
    from tensorflow.python.lib.io.file_io import copy as Copy
  File "/usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/python/lib/io/file_io.py", line 27, in <module>
    from tensorflow.python import pywrap_tensorflow
  File "/usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/python/pywrap_tensorflow.py", line 28, in <module>
    _pywrap_tensorflow = swig_import_helper()
  File "/usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/python/pywrap_tensorflow.py", line 24, in swig_import_helper
    _mod = imp.load_module('_pywrap_tensorflow', fp, pathname, description)
ImportError: /usr/local/lib/python3.5/dist-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/python/_pywrap_tensorflow.so: undefined symbol: PyBytes_AsStringAndSize

`
I am using Version: 1.0.0a6

Have I missed something in the installation process?
What can I do to fix this?

Thanks

Zihao Zheng · Answer 1 · Thu Jun 01 2017 14:09:53 GMT+0800 (China Standard Time)

Could you tell me the version? Is it 1.0.0a6 or 1.0.0a7? In general it's already usable after pip install tensorboard

Brad Duncan · Answer 2 · Thu Jun 01 2017 14:50:20 GMT+0800 (China Standard Time)

Hi, thanks for the response.
I am currently using Version: 1.0.0a6
and I got the error immediately after running sudo pip install tensorboard

Zihao Zheng · Answer 3 · Fri Jun 02 2017 10:19:47 GMT+0800 (China Standard Time)

@bradkyle Could you try to build from source? Seems the wrapper doesn't build correctly in Python3.5 python/_pywrap_tensorflow.so: undefined symbol: PyBytes_AsStringAndSize

Jch · Answer 4 · Tue Aug 29 2017 22:19:02 GMT+0800 (China Standard Time)

Maybe you can try sudo pip install tensorflow.tensorboard.

Sourabh Kulhare · Answer 5 · Wed Aug 30 2017 06:51:22 GMT+0800 (China Standard Time)

Hi, I am facing the same issue.
@Hskye, I tried installing tensorflow.tensorboard but it throwing this error:
Exception:
Traceback (most recent call last):
File "/usr/lib/python3/dist-packages/pip/basecommand.py", line 209, in main
status = self.run(options, args)
File "/usr/lib/python3/dist-packages/pip/commands/install.py", line 335, in run
prefix=options.prefix_path,
File "/usr/lib/python3/dist-packages/pip/req/req_set.py", line 732, in install
**kwargs
File "/usr/lib/python3/dist-packages/pip/req/req_install.py", line 837, in install
self.move_wheel_files(self.source_dir, root=root, prefix=prefix)
File "/usr/lib/python3/dist-packages/pip/req/req_install.py", line 1039, in move_wheel_files
isolated=self.isolated,
File "/usr/lib/python3/dist-packages/pip/wheel.py", line 346, in move_wheel_files
assert info_dir, "%s .dist-info directory not found" % req
AssertionError: tensorflow.tensorboard .dist-info directory not found

I am using python 3.5 and I installed tensorflow from pip3.

Thanks in advance.

Ramon Iglesias · Answer 6 · Wed Aug 30 2017 07:12:24 GMT+0800 (China Standard Time)

Hi all,
I'm facing the same issue. Also, Python 3.5.

David Axelrod · Answer 7 · Wed Aug 30 2017 09:40:19 GMT+0800 (China Standard Time)

Hi! Same issue here. Symbol not found: _PyBytes_AsString

Edit: Found a solution! Access tensorboard through your site-packages dir (I have tf globally installed)
python /Library/Frameworks/Python.framework/Versions/3.5/lib/python3.5/site-packages/tensorflow/tensorboard/main.py --logdir=./logs

Saeed · Answer 8 · Mon Sep 18 2017 22:19:23 GMT+0800 (China Standard Time)

Hi all,
I'm facing the same issue. Also, Python 3.5.

Veremeenko Artyom · Answer 9 · Mon Sep 25 2017 15:42:36 GMT+0800 (China Standard Time)

Hi, I'm having the same issue with python 3.4.3 on Ubuntu 14.04.5 LTS.
The trick supposed by @daxaxelrod helped, for me it's:

python3 /usr/local/lib/python3.4/dist-packages/tensorboard/main.py --logdir=./logs

Zeng Xiao · Answer 10 · Wed Oct 18 2017 11:29:38 GMT+0800 (China Standard Time)

same issue, python3.5.4, tensorboard a6, WSL. Installing tensorflow.tensorboard instead of tensorboard works fine.

Luke Wilson · Answer 11 · Thu Dec 14 2017 23:21:24 GMT+0800 (China Standard Time)

It looks like the issue is related to finding the python executable in the wrapper script (/usr/bin/tensorboard, line 48):

return SearchPath('python')

On systems where there is a default python2 installation, this will load python2, even if you have python3 installed (often called python3). When I print out args just before the try block on line 139 it returns:

['/usr/bin/python2.7', '/usr/lib/python3.4/site-packages/tensorboard/tensorboard.runfiles/org_tensorflow/tensorflow/tensorboard/tensorboard.py']

If I alter line 48 to search for python3 (instead of python), then tensorboard runs without issue.