dmbala

python-basics-tutorial

AI4Fold_Tutorials

scrrna-wb

Scripts to build an interactive workbench with Open Ondemand to run Cell Ranger pipelines specific to scRNA analysis

matlab-runtime-wigner-distribution

Create a matlab standalone app of solving Wigner distributions

Nf-DNA-Methylation-OARC

DNA Methylation analysis pipeline using nextflow on OARC Cluster.

rnaseq

RNA sequencing analysis pipeline using STAR, HISAT2 and Salmon with gene counts and quality control

rstudio-shahclass

2014-09-29-UC-Test

Workshop at UC: Testing

2014-12-15-UChicago

UChicago SWC-OSG workshop: http://swc-osg-workshop.github.io/2014-12-15-UChicago/

bcr-immcantation-example

Scripts to run BCR analysis using immcantation framework

binder-example-conda

binder-PyBigData

Binder for the workshop "Python for Big Data"

binder-PyDL

binder-PyML

bokeh

Bosco-Module

campus-as-a-lab

cvmfs-singularity-sync

Scripts to synchronize Singularity images to a CVMFS repository.

DHTC-materials

Materials developed for DHTC tutorials

extract-module-list

extracts the list of modules published in oasis

fosspage-test

A sample page for FOSS

HPC-GCP

Makeflow-example

Mf-smotnt

evolutionary dynamics on sequence data

MPro-Models

monomer and dimer structure predictions of MPro with AF2

Nf-RNA-Seq-OARC

RNA-Sequence pipeline using nextflow on OARC Cluster.

Omicron-Pred

Structure models for Omicron variant of Sars-Cov2

Public-Freundich-Lab

Freundlich lab publicly accessible repository

Singulrity-test

repo to test singularity image creation via github

unix-shell-tutorial