Dianali Rodriguez F's repositories
bioconda-recipes
Conda recipes for the bioconda channel.
FriendsDontLetFriends
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
hackathon_TSG_MEN1
Investigation of the differential expression of TSGs in health and disease
HIVsimulation
scripts used for HIV simulation work
insitu_probe_generator
Generate HCR-style Probe Pairs for mRNA visualization
Introduction-Simulations-in-R
Introduction to Simulations in R
module01_se_day5
Day 5: git and GitHub
msprime
A reimplementation of Hudson's classical ms simulator for modern data sets.
ncov2019-artic-nf
A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019
oneliners
Useful bash one-liners for bioinformatics.
shiver
Sequences from HIV Easily Reconstructed
single-cell-training_sib-swiss
Website hosted at https://sib-swiss.github.io/single-cell-training/latest/
single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
training-collectionsebepedroslab
Collection of bioinformatics training materials
tskit
The tree sequence toolkit
viralrecon
Assembly and intrahost/low-frequency variant calling for viral samples
Workshop_GitHub
Very basic workshop for members of the Solana Lab