dar58965 / JAnaP_Docker

Run Instructions

1. Set-up (Use cmd or Powershell)

|Make sure Git and Docker are installed on machine. All machines need them anyways.|

git --version
docker --version

|Check if you have any containers running the janap-jupyter-linux image. |

• List containers: docker ps -a
• If container with the 'janap-jupyter-linux' image exists: docker rm -v {container_name}
• If container exists and is running: docker stop {container name} then docker rm -v {container name}
• Run docker ps -a again to make sure the container is gone.

|If you have a forked repository: |

• Sync your fork with the master version using gh repo sync dar58965/JAnaP_for_Chloe -b {Forked name} You should do this every once in awhile. The Master version might have gotten better!

Git and Docker distributions: https://gitforwindows.org/ https://docs.docker.com/desktop/install/windows-install/

2. Delete janap-ubuntu-docker directory

rmdir /s /q janap-ubuntu-docker

3. Git clone Docker image

git clone https://github.com/dar58965/JAnaP_for_Chloe.git janap-ubuntu-docker

cd janap-ubuntu-docker

4. Docker build command. Creates docker image

docker build -t janap-jupyter-linux .

5. Docker run to initialize Junction Analyzer Program

docker run -p 5000:5000 -p 8888:8888 janap-jupyter-linux

For interactive mode:

docker run -it -p 5000:5000 -p 8888:8888 janap-jupyter-linux

6. Access program in browser

localhost:8888 for jupyter notebook
localhost:5000 for JAnaP

Clean Up When Done

• To view all current images: docker ps -a

• To remove container: docker stop {container name} then docker rm -v {container name}