danknights / mwas

Perform microbiome-wide association studies with a variety of models

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Allow input of classic OTU table or taxon table

danknights opened this issue · comments

-i or -I for one script, but not in others yet.

Generically detect if biom format or not, or tab delimited.

DK: "Detect if .biom extension present. If doesn't parse otherwise, state to the user that extension should be .biom if table is BIOM-formatted."