Algorithms failed: can't mount image /proc/self/fd/8
xuagu37 opened this issue · comments
Dear Cytomine experts,
I'm trying to launch algorithms in Cytomine but failed. The execution log is:
[31mFATAL: [0m container creation failed: mount error: can't mount image /proc/self/fd/8: failed to mount squashfs filesystem: invalid argument
The same issue was reported here but no solution was proposed.
I'm running Cytomine locally on Ubuntu 20.04.4. My singularity version is 3.9.1. Any help please? Thank you!
The error seems caused by the old version of Singularity v3.0.0 used in the Slurm v1.0.0. We changed the version of Slurm in the file start_deploy.sh.sample from v1.0.0 to v1.2.0 (where Singularity v3.7.3 installed), and now the error message's gone.