cwcyau

SPERS

SPatialomics Enhanced Research Suite

optimal_data

Repository for documentation of OPTIMAL master dataset.

simhospital

mixdir

Cluster high dimensional categorical datasets

chronist

Long-term analysis of emotion, age, and sentiment using Lifeslice and text records.

masonmd

R package to predict mutations whether can elicit nonsense-mediated decay or not

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

switchde

Inference of switch-like differential expression along single-cell trajectories

ouija

Descriptive probabilistic marker gene approach to single-cell pseudotime inference

ZIMM

Zero-inflated mixture model for single-cell data.

pcaReduce

gpseudotime

Bayesian Gaussian Process Latent Variable Models for pseudotime inference in single-cell RNA-seq data

pcaReduce

Code to support: "pcaReduce: hierarchical clustering of single cell transcriptional profiles"

archive-scater

An archived version of the scater repository, see https://github.com/davismcc/scater for the active version.

scge

An R package for simulating single cell gene expression data

ZIFA

Zero-inflated dimensionality reduction algorithm for single-cell data