error in association analysis
rfeng2023 opened this issue · comments
sQTL association analysis in job 8eaa4402df95e92a
on opcenter 23.22.157.8 showing
ERROR: cis_1 (id=8eaa4402df95e92a) returns an error.
ERROR: [cis_1]: [0]:
Failed to execute python /home/bst2126/output/cis_1_0_258db4a1.py
exitcode=139, workdir=/home/bst2126/data, stdout=/home/bst2126/output/psichomics_raw_data_bedded.qqnorm.imputed.bed.formated.bed.chr10_chr10_msex.cis_qtl.stdout, stderr=/home/bst2126/output/psichomics_raw_data_bedded.qqnorm.imputed.bed.formated.bed.chr10_chr10_msex.cis_qtl.stderr
error info is:
Error in
mutate()
:
ℹ️ In argument:qvalue_main = compute_qvalues(pvalue)
.
ℹ️ In group 1:molecular_trait_id = "A3SS_10_+_100381448_100388037_100388034_ENSG00000235823"
.
Caused by error inqvalue()
:
! p-values not in valid range [0, 1].