croth1

wtfpython

What the f*ck Python? 😱

msgpack-c

MessagePack implementation for C and C++ / msgpack.org[C/C++]

common-workflow-language

Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊

cwltool

Common Workflow Language reference implementation

docker

Official Docker project for Matomo Analytics

CCMgen

nb_conda_kernels

Package for managing conda environment-based kernels inside of Jupyter

sim_iCLIP

Simulation framework for iCLIP/eCLIP-seq data

PureCLIP_data

PureCLIP

Capturing protein-RNA interaction footprints from single-nucleotide CLIP-seq data

dataclasses

hub

A command-line tool that makes git easier to use with GitHub.

jedi-vim

Using the jedi autocompletion library for VIM.

docker-alpine

Alpine Linux Docker image. Win at minimalism!

django-dbbackup

Management commands to help backup and restore your project database and media files

web

The web front end for Overleaf, a web-based collaborative LaTeX editor

BaMM_webserver

Webserver for motif discovery with higher-order Bayesian Markov Models (BaMMs)

notebook

Jupyter Interactive Notebook

scipy

SciPy library main repository

merlot

Reconstruct the lineage topology of a scRNA-seq differentiation dataset.

prosstt

PRObabilistic Simulations of ScRNA-seq Tree-like Topologies

omniCLIP

omniCLIP is a CLIP-Seq peak caller

pyfaidx

Efficient pythonic random access to fasta subsequences

bedtools2

bedtools - the swiss army knife for genome arithmetic

PARpipe

Complete analysis pipeline for PAR-CLIP data

BaMMmotif2

Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs as modelled by higher-order Markov models.

genomepy

genes and genomes at your fingertips

sphinx

The Sphinx documentation generator

hieroglyph

Generate HTML presentations from plain text sources with all the power of Sphinx.

b-lore

Bayesian multiple logistic regression for GWAS meta-analysis