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clips / fewshot-biomedical-names

Code for the BioNLP 2021 paper "Scalable Few-Shot Learning of Robust Biomedical Name Representations"

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Instruction for using SNOMED as training data

ashishkishor opened this issue · comments

commented

Can you please provide instruction how to train the model with SNOMED training data and how to do continual learning i.e. how to train from SNOMED-CD to ICD-10 and vice versa.
and how to use pretrained name representation that got from BioBERT model and BNE Model as it is mentioned in the paper and in repository by only using fast text ,training has been done.

commented

Could you please give some instruction how to run the model using SNOMED as training set

commented

Hello Ashish,

Since I'm not allowed to share SNOMED-CT data directly with anyone, I'll have to provide a script for automatically extracting the data from source files that you should provide. I'll look into it.