Giters

chianti-atomic / ChiantiPy

ChiantiPy is a python package to calculate the radiative properties of astrophysical plasmas based on the CHIANTI atomic database

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

line identifications in spectrum plot

sengle01 opened this issue · comments

commented

Hello,

I apologize if I've missed it somewhere in the docs - when I'm plotting an emission spectrum that I've calculated with ChiantiPy, is there a built-in command/option for overlaying line identifications on the plot ?

Best,
Scott

commented

Hi Scott,
sorry there is not one at present but it would be good to have.
It should not be too difficult to cook up.
regards,
Ken

commented

I am working on a new release and will try to include something like that.

commented

Hi Ken,

No worries at all - thank you for the reply and for all the effort.
Best of luck with the new release; looking forward to seeing everything the team cooks up.

Best,
Scott

commented

Hi @kdere ,
Is there any update on the feature? Is it implemented yet?

commented

Hi,
I have uploaded several new demo notebooks: bunch_demo.ipynb, spectrum_demo.ipynb and spectrum_dem_2.ipynb.

They had labeling before but it is much improved. Also, the are notebooks so the code is editable

regards,
Ken

commented

Hi,
I have tried running the notebooks. In spectrum_demo.ipynb and spectrum_demo2.ipynb the code seems to look for a folder 'em' in CHIANTI directory, which doesnot exist in my version of database. I downloaded the database from https://www.chiantidatabase.org/chianti_download.html and has the version 10.0.1. Where can I get the em files required?

commented

Hi,
I will attach the files here. You will have to create the$XUVTOP./em folder and put them there.
I will ask that we make a new release.

file:///data2/a2git/chdbase/em/active_region_1993_serts_4T.em
file:///data2/a2git/chdbase/em/quiet_sun_1993_serts_4T.em

I am not sure if this works.
Ken

commented 
  6.166e+05      2.000e+09      4.969e+26 
  1.122e+06      2.000e+09      2.089e+27 
  1.862e+06      2.000e+09      7.889e+27 
  3.162e+06      2.000e+09      1.465e+28

-1
filename: active_region_1993_serts_4T.em
Brosius, J., Davila, J., Thomas, R., Monsignori-Fossi, B.
1996, ApJS, 106, 143
produced as a part of the 'CHIANTI' atomic database for astrophysical spectroscopy
K. Dere (GMU) - 2021 June 29

save this in XUVTOP as 'active_region_1993_serts_4T.em'

commented 
  6.166e+05      5.000e+08      1.183e+26 
  1.072e+06      5.000e+08      2.963e+26 
  1.622e+06      5.000e+08      1.073e+27 
  2.344e+06      5.000e+08      6.357e+26

-1
filename: quiet_sun_1993_serts_4T.em
Brosius, J., Davila, J., Thomas, R., Monsignori-Fossi, B.
1996, ApJS, 106, 143
produced as a part of the 'CHIANTI' atomic database for astrophysical spectroscopy
K. Dere (GMU) - 2021 May 20

save this in XUVTOP/em as 'quiet_sun_1993_serts_4T.em

commented
commented

I made the file and code seems to run fine. Thank you for your help. Great work as always.

commented
commented

version 0.14.0 has implemented methods that labels lines and spectra with the transitions