chapmanb / bcbb

Incubator for useful bioinformatics code, primarily in Python and R

Home Page:http://bcbio.wordpress.com

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glimmergff_to_proteins.py / Alternative Codon Table

zeyak opened this issue · comments

Hi,

I'd like to add this issue for those who'd like to use the script with an alternative codon table.

Example:
If you want to translate the sequence with a codon table 6 you need to change the script like the following,
protein_seq = gene_seq.translate(6)

Regards,
Zeynep