Beast code in Giters

Brian S. Yandell's repositories

qtl2ggplot

Extension of R/qtl2plot to ggplot2

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qtl2shiny

Shiny app for R/qtl2

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qtlhot

QTL hotspot inference

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qtlnet

Infer QTL genetic architecture and causal network for set of correlated traits

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intermediate

small R utility for mediation analysis

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ewing

Ewing's Quantitative Population Ethology

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geospatial

Geospatial Carpentries Workshop Play area

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qtl2pattern

Pattern support for R/qtl2

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qtl2rmd

Rmarkdown for qtl2 analyses

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qtlbim

QTL Bayesian Interval Mapping

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AttieDOv2

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byandell.github.io

Build a Jekyll blog in minutes, without touching the command line.

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CausalMST

Causal Model Selection Hypothesis Tests

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DO_Diet

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ESIIL-hackathon-2

https://github.com/CU-ESIIL/hackathon2023_datacube

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ESIIL_Hackathon

ESIIL Hackathon Oct_Nov 2023

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ewing_book

Ewing Book

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FounderCalciumStudy

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FounderDietStudy

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foundr

Multiparent Founder Study Tools

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foundrHarmony

Harmonize data for foundr analysis and visualization

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foundrShiny

Shiny app tools for foundr package

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geyser

Shiny Geyser App with and without Modules

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metabr

Metabolite Data Processing

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modulr

Trait Module Creation and Analysis

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Postdoc_Oasis

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qtl2

QTL analysis software for high-dimensional data and complex cross designs

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qtl2mediate

Mediation using package qtl2

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redscale

Redscale data for simulation with ewing package

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Tmem68

Tmem68 mRNA Data example from Chick et al. 2016

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