BUNPC

Homer3

MATLAB application for fNIRS data processing and visualization

AtlasViewer

MATLAB application for imaging and reconstruction of fNIRS data on atlas anatomy

pysnirf2

Python package for reading, writing and validating Shared Near Infrared Spectroscopy Format (SNIRF) files

ninjaGUI

fNIRS data acquisition GUI

DynamicSpeckleModel

MonteCarloWaveModel

snirf2bids

Python package for generating BIDS-fNIRS files from SNIRF files

snirf_quality_report

DataTree

SerialSectOCT

Annotation_tools

MATLAB applications for myelin and cell annotation of qBRM and 2P images

ninjaNIRS21

rsfcIOS

calculate resting state functional connectivity from IOS data.

snirf

SNIRF Format Specification

SpeckleDynamicsModelFitting

WavelengthSensitivityinFNIRS

2023-SCOS

Communications Biology 2023 - Measuring human cerebral blood flow and brain function with fiber-based speckle contrast optical spectroscopy system

bessBeamCapStall

BIDS-NIRS-Tapping

Example fNIRS BIDS dataset created by Rob Luke

capStall

fNIRS-BIDS-Validator

FuncRegistry

HomerPy

KalmanTuning

NeurovascularCouplingStroke

NN22-Technical-Documents

Repository for the storage and dissemination of NN22 technical documents

PlotProbe2

psoct_vessel_graphing

Suite of tools for segmenting vessels from PS-OCT images and then converting the segments to a graph.

SCOT_Rytov

Utils