budach / pysster

pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks

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Issues with keras 2.3.0

budach opened this issue · comments

When training two pysster Model objects with the same seed, model weights are not equal anymore with keras 2.3.0. Respective tests have been disabled for now. Might not need a fix, since we want to switch to tf.keras anyway.

Well, there seem to be more issues, like a decrease in predictive performance for my test models. I am blacklisting this keras version.

No changes with keras 2.3.1.