btcrabb

btcrabb

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btcrabb's repositories

SlideSeg

A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.

Language:Jupyter NotebookLicense:MITStargazers:79Issues:5Issues:9

GCLoss

A PyTorch implementation of the gradient consistency loss function.

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portfolio

Personal website

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Python-Projects-in-Machine-Learning

A collection of machine learning projects, programmed in python and implemented using Jupyter Notebooks

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caffe

Caffe fork that supports Conditional Random Fields (CRF) and Weight Maps

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CAP-Automated-Pipeline

Fully-automated, deep-learning based pipeline to generate biventricular cardiac models from raw cine SSFP MRI images.

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CAP-Automation

A repository containing tools for automating statistical cardiac modeling in association with the Cardiac Atlas Project.

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CMRG-ct2mri

Directions and python scripts for generating CIM-compatible DICOM files from CT images for statistical cardiac modeling.

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Curriculum-Modeling

In this repository, we will explore the impact of interleaved vs. blocked training schedules on the ability of a multi-task neural network to learn a radiology task. If the neural networks demonstrate results consistent with human learners, it may be possible to simulate curriculum changes and human subject experimentation using machine learning.

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NSQIP_ML

A repository to develop predictive algorithms for the NSQIP pituitary tumor dataset

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