brentp / bio-playground

miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.

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in bio-playground/reads-utils/guess-encoding.py, FASTQ range for Sanger should be (33, 73) instead of (33, 93)

anarkia7115 opened this issue · comments

commented

From wiki about FASTQ Phred Range(https://en.wikipedia.org/wiki/FASTQ_format), it says that the standard of Sanger Phred+33 has the lower bound of 33 and the upper bound of 73. Narrow down the range may increase the guess speed.

commented

solved