blahah / transrate

Understand your transcriptome assembly

Home Page:http://hibberdlab.com/transrate

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Using current version of Salmon

algebio opened this issue · comments

commented

Hi

I get this message:

Dependencies are missing:

  • snap (1.0dev.96)
  • bam-read (1.0.0)
  • salmon (0.6.0)
    You are running the packaged version of transrate
    This comes with the read-metrics dependencies pre-installed

If added the path to snap and bam-read but I don´t want to install an old version of salmon.
I have a newer version of salmon installed. How can I solve this dependency?

Thanks
Juan