Black and Hershey Labs software's repositories
wolfram_redcap
Formatting and calculations for Wolfram study REDCap data
utils
General utility scripts for the lab
tourette_imaging
Scripts for organizing/processing imaging data for the New Tics study
newtics_clinical
Catch-all repo for scripts for used in scoring, formatting, and summarizing clinical data for the NewTics study
ENIGMA_TS_T1_pipeline
ENIGMA_TS structural imaging pipeline
asl-scripts
Scripts to process ASL imaging data
TicTimer
TicTimer software tool
ppgviz
Web app for visualizing PPG data
blink-TS
Code for "The urge to blink in Tourette syndrome"
parse_vNav_Motion
A python script for parsing motion info in vNav DICOM series
3Dstat-LOOCV
LOOCV probing of utility of intermediate 3Dstat maps
pumpctrl
a java program to control and monitor a Harvard Model '44' infusion pump
gif_your_nifti
How to create fancy GIFs from an MRI brain image
niworkflows
Common workflows for MRI (anatomical, functional, diffusion, etc)
mriqc
Automated Quality Control and visual reports for Quality Assesment of structural (T1w, T2w) and functional MRI of the brain