Ben Whittle's repositories

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circAnnotate

A circular RNA junction annotation tool

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circrna

circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data

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nf-kallistoViral

A Nextflow workflow to quantify viral reads from bulk RNA-seq using Kallisto.

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pfv2

Circular RNA identification

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rnavar_softClippedBasesIncluded

Same as OG pipeline, but including soft clipped bases as a test

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