biothings / mygene.info

MyGene.info: A BioThings API for gene annotations

Home Page:http://mygene.info

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genomic position query in batch mode.

brentp opened this issue · comments

Hi, I can use e.g. v3/query?q=chr2:22000000-24000000 but this does not work with a post request to a batch query.
I have set scopes=symbol,entrezgene,ensemblgene,retired as I didn't see one that includes genomic position. Is there a way I can do a batch (post) query where some of the q entries are genomic coordinates?
thanks, and thanks for the great mygene.info service.

Hi @brentp, after discussing with the team, we decide not to enable batch queries for the genome range type of query. These range queries put lots of pressure on our server, and we're afraid that enabling batch queries for them without limit would be too much pressure for the server. So we would still recommend you to make multiple genomic range queries synchronously. Thanks!

i understand. thanks for the reply.