bioinformatist / LncPipeReporter

An R package for automatically aggregating and summarizing lncRNA analysis results.

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brunohhomem opened this issue · comments

Hi,
I'm running lncpipe, and the a error always show up when the lncpipeReporter process is running.

The error message is:
"processing file: reporter.Rmd Quitting from lines 51-99 (reporter.Rmd) Error in [.data.table(x, , 2) : Item 1 of j is 2 which is outside the column number range [1,ncol=1] Calls: run_report ... FUN -> determine type -> paste -> [ -> [.data.table Execution halted"
I'm using docker, lastest nextflow and lncpipe versions. I'm not a developer, could someone help me?

@bioinformatist can you have a check here?

@brunohhomem Can you provide us files for reproducing this matter?

Closed for no reply.