Bioinformatics Institute

Sibelia

Genome comparison via de Bruijn graph. To get the latest stable version, please visit our site.

caller_benchmark

Companion repository for the human variant calling pipeline comparison paper

RMAhunter

SICER2

Our re-implementation of SICER broad peak calling algorithm

russian_exome_pipeline

Description of tools and docker image for the Russian exome pipeline

ukb_phewas

Phenome-wide search for pleiotropic loci

exome

A complete pipeline for cohort-oriented exome processing and annotation.

Gematria

Fast and easy tool for genome mappability estimation

weswgs

afpaper

Scripts and data processing notes for Russian exome sequencing AF paper

diabetes

Whole-exome study of obesity and diabetes in Russian population

pregnancy_meta_analysis

rnaseq

bi2014-coffea-canephora

bi2014-mycoplasma-genitalium

bi2014-neurospora-crassa

bi2014-drosophila-melanogaster

covid19-exome

django_openid_provider

Forked from https://bitbucket.org/romke/django_openid_provider

EM_ampliseq_analysis

Analysis scripts for EM ampliseq manuscript

genequery

Scripts and pre-processing for GeneQuery database

GMA

guar_genotypes

Repository containing data and code for the guar genotyping project

microarray

Examples of microarray processing R scripts

myodiff

Working scripts and processed data for myodifferentiation paper

proteomics2014

Proteomics Homeworks, Fall 2014

radish_transcriptome_at

rma

RMA paper scripts

SBW_scripts

Scripts originally taken from Amazon clowd version of SBW-2016 setup.

uORF_annotator