Replace data.table dcast and melt by tidyverse pivot_wider and pivot_long
biodavidjm opened this issue · comments
Address Warnings:
The dcast generic in data.table has been passed a data.frame and will attempt to redirect to the reshape2::dcast; please note that reshape2 is deprecated, and this redirection is now deprecated as well. Please do this redirection yourself like reshape2::dcast(biorepliaggregated). In the next version, this warning will become an error.
data.table::melt: 13 times in...
MSstats_functions.R
analysisQuantifications.R
getMSstatsformat.R
metabolomics.R
msstat_summary.R
qualityControlSummaryExtended.R
data.table::dcast: 53 times in...
MSstats_functions.R
analysisQuantifications.R
enrichments.R
evidenceToSAINTqFormat.R
getMSstatsformat.R
msstat_summary.R
plots.R
qualityControlEvidenceBasic.R
qualityControlEvidenceExtended.R
qualityControlMetabolomics.R