bio4j

bio4j

Bio4j abstract model and general entry point to the project

angulillos

Java 8 library for strongly typed graph data

bio4j-examples

Bio4j usage examples

bio4j-neo4j

Neo4j-specific implementation of Bio4j

bio4j-titan

Titan-specific bio4j implementation

angulillos-titan

use Titan with a lot of angulillos

dynamograph

GSoC 2014 project - a DynamoDB based graph DB

el-grafo

GSoC 2014 project - D3-based Bio4j data model visualization

exporter

GSoC 2014 project

gsoc15

project ideas for Google Summer of Code 2015

angulillos-dynamodb

bio4j-graphical-tools

blueprints

Bio4j default Blueprints model implementation

data.uniprot

UniProt entry ADT and parsers

dynamograph-ddwriter

distributed writing code for dynamograph

modules

Statika-based bio4j module system

angulillos-gremlin

angulillos-neo4j

use Neo4j with a lot of angulillos!

bio4j-json

JSON serialization related classes for Bio4j entities used in Java programs

bio4j.github.com

bio4j.com website

data.enzyme

ENZYME data ADT and flat file parser

data.genbank

GenBank feature table ADT and parsers

data.go

Gene Ontology data ADT and parsers

data.uniref

UniRef data ADT and parsers

FOSDEM-2014

slides from the two bio4j sessions in the graph processing devroom

model-service

An http service to discover Bio4j doman model

module-template.g8

Giter8 template for a new Bio4j module

release.generic

Data import for standard open data

release.titan

xs4s

XML Streaming for Scala