Path to BioEn analyze executable on Mac
lukas-stelzl opened this issue · comments
On my laptop I had problems with DEER example Jupyter notebook as it did not find the BioEn executable. I installed the BioEn package with the --user flag.
bioen
-bash: bioen: command not found
The executable lives in /Users/lukas/.local/bin/bioen, which is was not on my path. A simple fix was simple to add this folder to the path. The question is whether there is a more general fix.
Not if you install with the --user flag. It will always depend on your path being set correctly which isn't done in a default installation. You can change the readme to recommend setting the path to export PATH=$HOME/.local/bin:$PATH or install the package in a conda-environment without the flag.
We can also look into making this a package available on conda if you like.
Great, thanks, @kain88-de!