Kinetic models for dynamic PET analysis
Clone this repository to your machine, then type in terminal:
pip install -e PATH_TO/kineticmodel
If you'd like to have wrappers for integration with nipype
, use the nipype
extra:
pip install -e PATH_TO/kineticmodel[nipype]
Must-to-have:
- open PET data set to use in examples
-
save_results
implementation inkineticmodel.py
- speed up SRTM_Lammertsma1996
- add examples for region-wise processing
- add examples for voxel-wise processing
- Additional tests to increase code coverage to 80%
- Improve ReadMe and donwload/install instructions
Nice-to-have:
- implementation of srtm2
- wrapper function for voxelwise image processing
- wrapper function for vertexwise image processing
-
nipype
integration - ❔ command line tools
- BIDS integration
- ❓ Incorporate unit handling with a package like
pint
🍺,units
,numericalunits
, orastropy.units