AltamISA parsing fails with template "stem_cell_core_sc"
mikkonie opened this issue · comments
Similar to #5:
s_Study_Title.txt: Found annotated material/file without name: Material(type='Source Name', unique_name='p4-s0-Empty Source Name-1-1', name='', extract_label=None, characteristics=(Characteristics(name='Organism', value=[OntologyTermRef(name='Homo sapiens', accession='http://purl.bioontology.org/ontology/NCBITAXON/9606', ontology_name='NCBITAXON')], unit=None), Characteristics(name='Source Type', value=['hiPSC'], unit=None), Characteristics(name='Cellline', value=[''], unit=None), Characteristics(name='Genetic modifications', value=[''], unit=None)), comments=(), factor_values=(), material_type=None, headers=['Source Name', 'Characteristics[Organism]', 'Term Source REF', 'Term Accession Number', 'Characteristics[Source Type]', 'Characteristics[Cellline]', 'Characteristics[Genetic modifications]'])
s_Study_Title.txt: Found start node without original name: p4-s0-Empty Source Name-1-1
s_Study_Title.txt: Found annotated material/file without name: Material(type='Source Name', unique_name='p4-s0-Empty Source Name-1-2', name='', extract_label=None, characteristics=(Characteristics(name='Organism', value=[OntologyTermRef(name='Homo sapiens', accession='http://purl.bioontology.org/ontology/NCBITAXON/9606', ontology_name='NCBITAXON')], unit=None), Characteristics(name='Source Type', value=['hiPSC'], unit=None), Characteristics(name='Cellline', value=[''], unit=None), Characteristics(name='Genetic modifications', value=[''], unit=None)), comments=(), factor_values=(), material_type=None, headers=['Source Name', 'Characteristics[Organism]', 'Term Source REF', 'Term Accession Number', 'Characteristics[Source Type]', 'Characteristics[Cellline]', 'Characteristics[Genetic modifications]'])
s_Study_Title.txt: Found start node without original name: p4-s0-Empty Source Name-1-2