Barbara DiazRohrer's repositories
cellpose-napari
napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool
Language:PythonBSD-3-Clause000
cellpose-omni-test
a generalist algorithm for cellular segmentation
Language:PythonBSD-3-Clause000
CellProfiler
An open-source application for biological image analysis
Language:PythonNOASSERTION000
CellProfiler-plugins
Community-contributed and experimental CellProfiler modules.
Language:Python000
core
Core classes and components used by CellProfiler
Language:PythonNOASSERTION000
Distributed-CellProfiler
Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.
Language:PythonNOASSERTION000
Language:CSS000
examples
Example CellProfiler pipelines.
Language:MakefileBSD-3-Clause000
IVEN-Code
Repository for all code and tutorials behind IVEN
Language:MATLAB000
profiling-recipe
Image-based Profiling Recipe
Language:PythonBSD-3-Clause000
tutorials
CellProfiler tutorial pipelines and images
BSD-3-Clause000