Biological and Chemical Oceanography Data Management Office (BCO-DMO)'s repositories
Ocean-Data-Ontology
Application-level ontology for describing oceanographic datasets
bcodmo_frictionless
Custom datapackage-pipelines processors for BCODMO
OSPREY-manual-RDF-links
links to external RDF resources that haven't been committed to the OSPREY database
biogeoscapes
The Biogeoscapes website
blog.bco-dmo.org
BCO-DMO blog
bcodmo_data_viewer
A react web component to view data
Coral-resilience-to-marine-heatwaves
Data set and R script for Brown et al. 'Temperature variability does not promote coral resilience to marine heatwaves'
FAIR-data-assessment
A SHACL implementation over Science-on-Schema.org data graphs for FAIR Data Principles
goodtables-ui
A web UI for goodtables validation and report visualizations.
jgofs-TSV-to-CSV
Convert JGOFS TSV files to CSV format
Labyrinthula
R code for microbial community analysis accompanying Schenck, DuBois, Kardish, Stachowicz and Hughes 2021
migration_scripts
General migration scripts
OSPREY-LTER-Harvest
Resources for the LTER metadata harvest
react-leaflet-draw
React component for leaflet-draw on top of react-leaflet
redmine_aws
Terraform and deployment scripts for redmine on AWS
robot
ROBOT is an OBO Tool
schema.geolink.org
A static copy of the schema.geolink.org website
shacl-masterclass
SHACL masterclass at Knowledge Connexions 2020, Knowledge Graph Conference 2021 & 2022.
submission_validation_server
A python web server that runs jobs to validate submissions using goodtables
SWARM_CODAR
Fork made for curatorial purposes at BCO-DMO.
SWARM_LCS
code for the calculation of Lagrangian coherent structures from HFR observed surface currents in Palmer Deep Canyon
tabulator-py
Python library for reading and writing tabular data via streams.
webcomponent_data_viewer
Visualize a Frictionless Data Package
workshop_bios_oceanographic_data
Repository holding lesson on Data Management Basics. See webpage for rendered view: https://bcodmo.github.io/workshop_bios_oceanographic_data/