hackseq19
Organizational files and discussions about hackseq 2019
For details about last years hackathon, checkout our wiki below.
hackseq18 Organizational Wiki (HOWTO)
Question? --> Email Us
When? Where? What?
We are having a Genomics Hackathon in Vancouver in 2019.
The website for the event lives here: http://www.hackseq.com/
The twitter account for this event is @hackseq
This event will be modeled on the NCBI hackathon format.
Organizing Committee
- Emre Erhan (@emreerhan)
- Kristen Gray (@klgray25)
- Justin Jia (@imasianxd)
- Jennifer Lin (@jenjaelin)
- Sasha Maslova (@smaslova)
- Noushin Nabavi (@NoushinN)
- Baraa Orabi (@baraaorabi)
- Alex Sweeten (@sweetiepi)
- Aris Grout (@arisgrout)
- Ben Cardoen (@bencardoen)
- David Guo (@itsDagu)
- Kate Gibson (@kfgibson)
- Ogan Mancarcı (@oganm)
- Reva Shenwai (@scatcher125)
hackseq19 Projects
| # | Project name | Team lead | Co-lead | Repo |
|---|---|---|---|---|
| 1 | BeRi Environments for R Installations | Rob Gilmore | https://github.com/hackseq/hs19-beri | |
| 2 | Yeast-omics | Noushin Nabavi | Matt Emery | https://github.com/hackseq/hs19-yeast |
| 3 | Rule-based Learning for Transcriptional Regulation | Alex Sweeten | https://github.com/hackseq/hs19-rule | |
| 4 | BugSeq | Sam Chorlton | https://github.com/schorlton/bugseq-web | |
| 5 | Mapping Polypharmacy Chemical Reactions in At-Risk Populations | Artem Babaian | German Novakovsky | https://github.com/hackseq/hs19-game |
| 6 | TALR: Targeted Assembly of Linked Reads | Shaun Jackman | https://github.com/hackseq/hs19-talr | |
| 7 | Visualizing Very Large Biological Networks | Anamaria Crisan | https://github.com/hackseq/hs19-biovis | |
| 8 | Trends in Bioinformatics with RLadies | Jasmine Lai | Raissa Philibert | https://github.com/hackseq/hs19-trends |
| 9 | TraIN (Translating from Immunology to Neuroscience) | Lucia Guerri | https://github.com/hackseq/hs19-train | |
| 10 | Hypothesis-Bio Automated Bioinformatics Bug Discovery | Benjamin Lee | https://github.com/Lab41/hypothesis-bio | |
| 11 | Development of an interpretable deep learning framework to detect epistatic interactions between SNPs | Sean La | Habib Daneshpajouh | https://github.com/hackseq/hs19-deep |
| 12 | BiocSwirl()Terminal based Bioconductor Courses | Lisa N. Cao | Mariam Arab | https://github.com/hackseq/hs19-biocswirl |
| 13 | Predicting Short-Term Success of Influenza Virus Variants | Caroline Colijn | Priscila Biller | https://github.com/hackseq/hs19-flu |
| 14 | Mapping Polypharmacy Chemical Reactions in At-Risk Populations | Veena Ghorakavi | https://github.com/hackseq/hs19-pop | |
| 15 | Virtual and Augmented Reality for Single-Cell Data Exploration | Michael Vinyard | Luca Pinello | https://github.com/hackseq/hs19-var |