Beast code in Giters

Ayixon's starred repositories

SEER, reimplemented in python 🐍🔮

Language:PythonApache-2.010900

Rapid Profiling and Deconvolution Tool for Metagenomes

Language:PythonMIT200

colorblind friendly color palettes and ggplot2 graphic system extensions for publication-quality scientific figures

Language:RNOASSERTION9000

Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes

Language:PythonGPL-3.024900

A general metagenomics data mining system focus on robust microbiome research

Language:PythonGPL-3.05500

Rapid Profiling and Deconvolution Tool for Metagenomes

Language:PythonMIT11100

Gapless provides combined scaffolding, gap-closing and assembly correction with long reads

Language:PythonMIT3200

A simple and fast metassembler and assembly gap filler designed for long molecule based assemblies.

Language:C++GPL-3.019800

Weighted quality evaluation of assembled genomes

Language:PythonGPL-3.0200

All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")

Language:PythonMIT6900

Simple Bioinformatic Tools

Language:Python100

Useful bash one-liners for bioinformatics.

ATLAS - Three commands to start analyzing your metagenome data

Language:PythonBSD-3-Clause37000

A user-friendly workflow for phylogenomics

Language:ShellGPL-3.019700

Streamlining phylogenomic data gathering, processing and visualization

Language:PythonGPL-3.08700