Beast code in Giters

AstraZeneca - NGS Team's repositories

Language:PerlMIT186 52 128

VarDict Java port

Language:JavaMIT127 40 287

Reference data: BED files, genes, transcripts, variations.

Language:Python79 32 4

Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem

Language:C++MIT29 30 16

Simplify snpEff annotations for interesting cases

Language:PythonNOASSERTION21 23 2

Language:PerlMIT4 31 3

Aggregate results from bioinformatics analyses across many samples into a single report.

Language:PythonGPL-3.03 190

Language:JavaScriptAGPL-3.01 60

Browser for ExAC consortium data

Language:JavaScriptMIT0200

pre-commit git hooks to take care of Terraform configurations 🇺🇦

Language:ShellMIT010

Estimating tumor fraction in cell-free DNA from ultra-low-pass whole genome sequencing.

Language:RGPL-3.0020

MultiQC plugin interacting with the Illumina Genologics Clarity LIMS

Language:PythonMIT0210

Utility functions for bioinformatics projects

Language:JavaScript030

MPL-2.0000

Tools for working with SAM/BAM data

Language:DGPL-2.0060

Alignment coverage analysis tool

Language:HTMLGPL-3.0020