cannot upload .ris file

Question

cannot upload .ris file

Stangenberg-Gliss opened this issue a year ago · comments

Describe the bug
I started a new procekt and was unable to upload a .ris file. When trying to upload I got the answer: Failed to get file. Can only use .str accessor with string values!

To Reproduce

I created a new project
I tried to upload a .ris file by drag and drop and failed

Screenshots

Version information

OS: Windows
ASReview version 1.2

Additional context
Add any other context about the problem here.

Stangenberg-Gliss · Answer 1 · Mon Jul 24 2023 18:32:58 GMT+0800 (China Standard Time)

After the drag and drop attempt I tried the "normal" upload and failed again
I also deleted the new project and tried a fresh start - and still failed...

Jonathan de Bruin · Answer 2 · Tue Jul 25 2023 17:55:20 GMT+0800 (China Standard Time)

Hi, thanks for reporting.

Can you share the RIS file (by email)? Can you also share the outcome of pip show rispy?

Stangenberg-Gliss · Answer 3 · Tue Jul 25 2023 21:17:24 GMT+0800 (China Standard Time)

Hi, Thanks for your response. Of course I can share my file (see attachment) Sorry, as I do not understand the second question I cannot help/respond. Regards Mit freundlichen Grüßen, Kirsten Stangenberg-Gliss Wiss. Mitarbeiterin | „Zukunft FH-Prof“ HAWK Hochschule für angewandte Wissenschaft und Kunst Hildesheim/Holzminden/Göttingen Promotionskolleg „Digitalisierung für Gesundheit“ | Goschentor 1, Alte Bibliothek | 31134 Hildesheim E-Mail: ***@***.*** | Tel.: 05121/881-118 | Fax: 05121/881-200118 www.hawk.de Präsident: Dr. Marc Hudy Hauptberufliche Vizepräsidentin: Dr. Anne Faber USt.-ID-Nr.: DE 154 261 014 | Steuernummer: 30/210/09001 Von: Jonathan de Bruin ***@***.***> Gesendet: Dienstag, 25. Juli 2023 11:56 An: asreview/asreview ***@***.***> Cc: Stangenberg-Gliss, Kirsten ***@***.***>; Author ***@***.***> Betreff: Re: [asreview/asreview] cannot upload .ris file (Issue #1503) Hi, thanks for reporting. Can you share the RIS file (by email)? Can you also share the outcome of pip show rispy? — Reply to this email directly, view it on GitHub<#1503 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/BBPEGEQJ7VCU27GZAGWT2HLXR6JZHANCNFSM6AAAAAA2VL4RHE>. You are receiving this because you authored the thread.Message ID: ***@***.******@***.***>>

Rens van de schoot · Answer 4 · Thu Jul 27 2023 17:50:24 GMT+0800 (China Standard Time)

Could you send the file to asreview@uu.nl? thanks!

Rens van de schoot · Answer 5 · Thu Jul 27 2023 21:30:10 GMT+0800 (China Standard Time)

Thank you for contributing the data. As a workaround to the encoding issue, I've imported the RIS file into a reference manager, then re-exported it. Consequently, the file could be successfully imported into ASReview. We're still working on identifying and resolving the original encoding problem, but this interim solution should enable you to proceed with your work.

Regarding the dataset, I noticed there are a total of 497 records, of which 36 appear to be pre-labelled as ASReview_relevant in ASReview. Can you please confirm if my understanding is correct? This information will assist in ensuring accuracy during our data handling process.

Stangenberg-Gliss · Answer 6 · Thu Jul 27 2023 21:47:45 GMT+0800 (China Standard Time)

Thank you so much! Yes, I can confirm, your understanding is correct. I am currently trying to find my way through the different AI possibilities for my systematic review…. Mit freundlichen Grüßen, Kirsten Stangenberg-Gliss Wiss. Mitarbeiterin | „Zukunft FH-Prof“ HAWK Hochschule für angewandte Wissenschaft und Kunst Hildesheim/Holzminden/Göttingen Promotionskolleg „Digitalisierung für Gesundheit“ | Goschentor 1, Alte Bibliothek | 31134 Hildesheim E-Mail: ***@***.*** | Tel.: 05121/881-118 | Fax: 05121/881-200118 www.hawk.de Präsident: Dr. Marc Hudy Hauptberufliche Vizepräsidentin: Dr. Anne Faber USt.-ID-Nr.: DE 154 261 014 | Steuernummer: 30/210/09001 Von: Rens van de schoot ***@***.***> Gesendet: Donnerstag, 27. Juli 2023 15:30 An: asreview/asreview ***@***.***> Cc: Stangenberg-Gliss, Kirsten ***@***.***>; Author ***@***.***> Betreff: Re: [asreview/asreview] cannot upload .ris file (Issue #1503) Thank you for contributing the data. As a workaround to the encoding issue, I've imported the RIS file into a reference manager, then re-exported it. Consequently, the file could be successfully imported into ASReview. We're still working on identifying and resolving the original encoding problem, but this interim solution should enable you to proceed with your work. Regarding the dataset, I noticed there are a total of 497 records, of which 36 appear to be pre-labelled as ASReview_relevant in ASReview. Can you please confirm if my understanding is correct? This information will assist in ensuring accuracy during our data handling process. — Reply to this email directly, view it on GitHub<#1503 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/BBPEGEQ45TYAQY6L5OWD2DDXSJUO3ANCNFSM6AAAAAA2VL4RHE>. You are receiving this because you authored the thread.Message ID: ***@***.******@***.***>>

Stangenberg-Gliss · Answer 7 · Thu Jul 27 2023 21:59:03 GMT+0800 (China Standard Time)

As I wanted to have one .ris file out of several files from my PubMed search I imported the single PubMed .nbib files in Citavi and downloaded them as one .ris file.
When I could not upload it in asreview I tried the same file in CADIMA and that worked fine....

Thank you again for your help. I now can proceed with my work!