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Ashish Damania (ashishdamania)

ashishdamania

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Ashish Damania's starred repositories

file2meco

Tranform files to the microtable object in microeco package

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ante

A safe, easy systems language

Language:RustLicense:MITStargazers:1881Issues:0Issues:0

Drews2022_CIN_Compendium

Main repository for Drews et al. (Nature, 2022)

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gfortran-for-macOS

GNU Fortran (and GCC) compilers for macOS

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manim

Animation engine for explanatory math videos

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R-BBEdit

BBEdit package for working with R files

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grimer

GRIMER performs analysis of microbiome studies and generates a portable and interactive dashboard integrating annotation, taxonomy and metadata with focus on contamination detection.

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wtfpython

What the f*ck Python? 😱

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CodeEdit

CodeEdit App for macOS – Elevate your code editing experience. Open source, free forever.

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CAMMiQ

Metagenomics microbial abundance quantification

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TMB

The tumor microbiome analysis pipeline

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pipebind

Flexible binding for complex function evaluation with the Base R |> pipe

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snakecase

🐍🐍🐍 A systematic approach to parse strings and automate the conversion to snake_case, UpperCamelCase or any other case.

Language:RLicense:GPL-3.0Stargazers:145Issues:0Issues:0

mbImpute

mbImpute: an accurate and robust imputation method for microbiome data

Language:RLicense:MITStargazers:9Issues:0Issues:0

ggblend

Support for blend modes in ggplot2

Language:RLicense:NOASSERTIONStargazers:163Issues:0Issues:0

Bash-Oneliner

A collection of handy Bash One-Liners and terminal tricks for data processing and Linux system maintenance.

License:MITStargazers:9144Issues:0Issues:0

tidyHeatmap

Draw heatmap simply using a tidy data frame

Language:RStargazers:291Issues:0Issues:0

tidyheatmaps

Heatmaps from Tidy Data

Language:RLicense:NOASSERTIONStargazers:27Issues:0Issues:0

micropower

power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA

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panaroo

An updated pipeline for pangenome investigation

Language:PythonLicense:MITStargazers:251Issues:0Issues:0

agc

Assembled Genomes Compressor

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ggbump

A geom for ggplot to create bump plots

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CartoGRAPHs

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kana

Single cell analysis in the browser

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plotgardener

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ggprism

ggplot2 extension inspired by GraphPad Prism

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IFAA

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crisprTrack

crisprTrack identifies putative 20-mer CRISPR/Cas9 targets in a given genome, and outputs a BED file that can be used for visualization.

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MetaLonDA

METAgenomic LONgitudinal Differential Abundance method

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nipper-metatranscriptomics

Analysis of metagenomic and metatranscriptomic data from the NiPPeR Study

Language:RLicense:MITStargazers:1Issues:0Issues:0