Alexander Koc's repositories
parallel-structure
A probably over-engineered bash-script for starting parallel runs of structure for different population sizes and numbers of replicates.
apogeereader
An R package for reading Spectrawiz and Spectrovision spectral data files
htmx-select-paginated-table-rows
I want to select rows in a paginated table for export to TSV w/o storing state info on server or in JS
nextflow-test
Repo for learning how 2 nextflow
alkc.github.io
Source code for my blogdown site
BaseSpace_Clarity_LIMS
API libraries, application examples, and custom tools for BaseSpace Clarity LIMS
emacs-config
Doom emacs config
empty-flask-app
Template repo for new flask applications.
flask-mongomock-example
Example of using mongomock for testing in a global mongo db class in a flask app
htmx-test
let's to have amusements
multiline-prompt
shell prompt cobbled together from code here and there
nf-core-modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
nf-process-browser
cli utility to jump around in nextflow workdirs
Paper_Notes
This will contain my notes for research papers that I read.
project-reproducibility
Reproduciblity course project 2020
raredisease
Call and score variants from WGS/WES of rare disease patients.
rstudio_git_test
Test repo for the reproducibility in data science course
scout
VCF visualization interface
surviving-nextflow
<melting face emoji>